# --------------------------------------------
# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
# --------------------------------------------
 
cff-version: 1.2.0
message: 'To cite package "hicream" in publications use:'
type: software
license: GPL-3.0-or-later
title: 'hicream: HIC diffeREntial Analysis Method'
version: 0.0.4
doi: 10.32614/CRAN.package.hicream
identifiers:
- type: url
  value: https://scales.pages-forge.inrae.fr/hicream/
abstract: Perform Hi-C data differential analysis based on pixel-level differential
  analysis and a post hoc inference strategy to quantify signal in clusters of pixels.
  Clusters of pixels are obtained through a connectivity-constrained two-dimensional
  hierarchical clustering.
authors:
- family-names: Jorge
  given-names: Elise
  email: elise.jorge@inrae.fr
- family-names: Foissac
  given-names: Sylvain
  email: sylvain.foissac@inrae.fr
  orcid: https://orcid.org/0000-0002-2631-5356
- family-names: Hocking
  given-names: Toby
  email: toby.hocking@r-project.org
  orcid: https://orcid.org/0000-0002-3146-0865
- family-names: Neuvial
  given-names: Pierre
  email: pierre.neuvial@math.univ-toulouse.fr
  orcid: https://orcid.org/0000-0003-3584-9998
- family-names: Vialaneix
  given-names: Nathalie
  email: nathalie.vialaneix@inrae.fr
  orcid: https://orcid.org/0000-0003-1156-0639
repository: https://eoojj.r-universe.dev
commit: b003479e57030d3007e897943556f668cf536fc5
url: https://forge.inrae.fr/scales/hicream
date-released: '2026-01-30'
contact:
- family-names: Jorge
  given-names: Elise
  email: elise.jorge@inrae.fr